Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RNU1-59P-201ENST00000364829 162 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RNA5SP284-201ENST00000384547 118 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL122016.1-201ENST00000403365 367 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL354719.1-201ENST00000406535 843 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MIR1303-201ENST00000408625 86 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RPL12P9-201ENST00000412942 488 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL354890.1-201ENST00000413730 346 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 BOLA3P4-201ENST00000418151 400 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RPL35AP12-201ENST00000425362 338 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 HNRNPA1P18-201ENST00000433537 927 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MTND3P2-201ENST00000438452 342 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SEPT14P3-201ENST00000439401 183 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL732372.2-207ENST00000445840 183 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SEPT14P2-201ENST00000453405 183 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 ACA64.4-201ENST00000459070 127 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RPL7P19-201ENST00000469948 618 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RPS15AP36-201ENST00000492022 382 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC023194.1-201ENST00000493084 308 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RN7SL57P-201ENST00000493687 290 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC090638.1-201ENST00000498296 909 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC139783.2-201ENST00000504847 1145 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SEPT14P4-201ENST00000513445 186 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RNU6-583P-201ENST00000516012 92 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 FO082796.1-201ENST00000523795 183 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AP000648.1-201ENST00000529682 397 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 HMGN2P47-201ENST00000559378 272 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC020661.2-201ENST00000560114 134 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MIR4307-201ENST00000582802 84 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MIR132-201ENST00000591554 101 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL451049.1-201ENST00000608672 497 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RMST_3.1-201ENST00000611651 109 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC040896.1-201ENST00000613819 479 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 U1.25-201ENST00000614085 162 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AL139099.4-201ENST00000614802 114 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 U1.34-201ENST00000618578 162 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 U1.31-201ENST00000620022 160 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 RMST_7.1-201ENST00000621935 268 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 NAMPTP1-201ENST00000440465 2514 ntBASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP3Q9BWW4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 RNU6-582P-201ENST00000362989 107 ntBASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 SNORA63C-201ENST00000364578 129 ntBASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 OR52E6-202ENST00000379946 954 ntBASIC4.92□□□□□ -1.62
SSBP3Q9BWW4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms