Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC091860.1-201ENST00000505723 432 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 KRT19P6-201ENST00000510983 209 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 FTH1P9-201ENST00000513251 355 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 HIGD1AP6-201ENST00000521833 279 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC021006.3-201ENST00000530771 192 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AP001880.2-201ENST00000538233 448 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 CYP2C60P-201ENST00000566088 139 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 BPTFP1-201ENST00000579209 492 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC008687.2-201ENST00000597865 520 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC087763.1-201ENST00000603391 286 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AL445222.1-201ENST00000607259 628 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC018754.1-201ENST00000607486 925 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AF129408.1-201ENST00000608767 431 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AL359535.1-201ENST00000612100 1087 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC097504.1-201ENST00000515103 2415 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AL031985.3-201ENST00000565390 2449 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC109780.1-201ENST00000451768 1344 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AL627171.1-201ENST00000618845 1308 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 SGO1P1-201ENST00000603525 1447 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 XIAPP3-201ENST00000312918 795 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 RNA5SP305-201ENST00000362665 119 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 RNU6-619P-201ENST00000365146 108 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 DPPA2P3-201ENST00000411853 655 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 OR51B3P-201ENST00000412287 913 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 RSU1P3-201ENST00000412878 835 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC027644.1-201ENST00000419595 298 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 RPL23AP15-201ENST00000450202 459 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 RPS5P7-201ENST00000456664 608 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 RPS20P21-201ENST00000466859 343 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 RN7SL629P-201ENST00000489622 285 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC005351.1-201ENST00000511152 786 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 RNU6-415P-201ENST00000516252 97 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 OR8I1P-201ENST00000529291 931 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 NIFKP8-201ENST00000560500 874 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 MIR4644-201ENST00000579929 84 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC017100.2-201ENST00000584628 355 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC002487.1-201ENST00000604565 994 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AP002360.3-201ENST00000607673 710 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC093673.2-201ENST00000609674 331 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC103858.2-201ENST00000621471 543 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 AC112694.2-201ENST00000623697 768 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 INTS6P1-201ENST00000504674 2530 ntBASIC3.97□□□□□ -1.77
RFT1Q96AA3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RFT1Q96AA3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFT1Q96AA3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms