Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NUDCD3Q8IVD9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.91□□□□□ -1.78
NUDCD3Q8IVD9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NUDCD3Q8IVD9 MFSD8-216ENST00000641147 4009 ntBASIC3.91□□□□□ -1.78
NUDCD3Q8IVD9 EXOC5P1-201ENST00000510543 1969 ntBASIC3.91□□□□□ -1.78
NUDCD3Q8IVD9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
NUDCD3Q8IVD9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.9□□□□□ -1.78
NUDCD3Q8IVD9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC007685.1-201ENST00000329806 452 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 CCNB2P1-201ENST00000399411 1150 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 MIR1183-201ENST00000408856 89 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC011933.1-201ENST00000413334 321 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC105402.1-201ENST00000413336 545 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 RBMY2KP-201ENST00000418221 992 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 RPS17P13-201ENST00000448974 407 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 MTCO3P16-201ENST00000454456 754 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC116533.1-201ENST00000459748 321 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC068305.1-201ENST00000497406 726 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC092747.2-201ENST00000545069 983 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 MIR4443-201ENST00000585052 53 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC067852.4-201ENST00000590314 478 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 MIR7151-201ENST00000617477 60 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AL713922.2-201ENST00000619384 716 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AL139089.1-201ENST00000620372 975 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC073342.3-201ENST00000624211 193 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AC091905.1-201ENST00000624400 311 ntBASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUDCD3Q8IVD9 AL118496.1-201ENST00000440201 1812 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 RNU6-452P-201ENST00000384406 107 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL161909.1-201ENST00000397390 712 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC010385.1-201ENST00000412374 256 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 HSPE1P12-201ENST00000412576 301 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC093698.1-201ENST00000423843 571 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 OR5BE1P-201ENST00000425977 939 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL365396.1-201ENST00000430854 671 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC083863.1-201ENST00000438811 231 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC098824.1-201ENST00000453565 980 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC006511.1-201ENST00000470614 315 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 RN7SL604P-201ENST00000492589 296 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AGGF1P8-201ENST00000562979 1000 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AP001180.3-201ENST00000582221 145 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC005191.1-201ENST00000603950 358 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AL390816.3-201ENST00000604527 1066 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC100814.1-201ENST00000606963 623 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC015802.5-201ENST00000607478 399 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 ATE1-AS1-202ENST00000636460 506 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 OR5BE1P-202ENST00000641168 1176 ntBASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUDCD3Q8IVD9 HSPA8P1-201ENST00000425843 1833 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AC073429.2-201ENST00000569694 1444 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 CR381670.1-201ENST00000624291 1693 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 MIR423-201ENST00000362201 94 ntBASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.88□□□□□ -1.79
NUDCD3Q8IVD9 AL590139.1-201ENST00000416267 400 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms