Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SNORD95-201ENST00000579879 68 ntBASIC5.01□□□□□ -1.61
CD40P25942 MIR4505-201ENST00000582238 73 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40P25942 AC011477.5-201ENST00000586571 259 ntBASIC5.01□□□□□ -1.61
CD40P25942 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 IMMP1LP1-201ENST00000605170 488 ntBASIC5.01□□□□□ -1.61
CD40P25942 MIR6768-201ENST00000610734 72 ntBASIC5.01□□□□□ -1.61
CD40P25942 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 AC136475.10-201ENST00000620253 385 ntBASIC5.01□□□□□ -1.61
CD40P25942 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 AC004009.2-201ENST00000623016 728 ntBASIC5.01□□□□□ -1.61
CD40P25942 PISRT1-201ENST00000626175 531 ntBASIC5.01□□□□□ -1.61
CD40P25942 MIR6863-201ENST00000636112 90 ntBASIC5.01□□□□□ -1.61
CD40P25942 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.01□□□□□ -1.61
CD40P25942 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 GTF2IP4-201ENST00000453092 2054 ntBASIC5.01□□□□□ -1.61
CD40P25942 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
CD40P25942 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
CD40P25942 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 AL122126.1-201ENST00000546905 1318 ntBASIC5□□□□□ -1.61
CD40P25942 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5□□□□□ -1.61
CD40P25942 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5□□□□□ -1.61
CD40P25942 RNU6-28P-201ENST00000362378 107 ntBASIC5□□□□□ -1.61
CD40P25942 SNORD1C-201ENST00000363315 78 ntBASIC5□□□□□ -1.61
CD40P25942 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5□□□□□ -1.61
CD40P25942 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CD40P25942 GSTA9P-201ENST00000406231 611 ntBASIC5□□□□□ -1.61
CD40P25942 RNA5SP251-201ENST00000410614 137 ntBASIC5□□□□□ -1.61
CD40P25942 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 MTATP6P27-201ENST00000416987 621 ntBASIC5□□□□□ -1.61
CD40P25942 RPL31P45-201ENST00000419532 356 ntBASIC5□□□□□ -1.61
CD40P25942 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 RPL12P34-201ENST00000424532 479 ntBASIC5□□□□□ -1.61
CD40P25942 AL662874.1-201ENST00000426065 230 ntBASIC5□□□□□ -1.61
CD40P25942 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5□□□□□ -1.61
CD40P25942 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5□□□□□ -1.61
CD40P25942 MTND4LP10-201ENST00000435146 291 ntBASIC5□□□□□ -1.61
CD40P25942 AL451074.3-201ENST00000437709 472 ntBASIC5□□□□□ -1.61
CD40P25942 AC122718.1-201ENST00000439448 744 ntBASIC5□□□□□ -1.61
CD40P25942 DNAJC19P5-201ENST00000443295 316 ntBASIC5□□□□□ -1.61
CD40P25942 RPL17P49-201ENST00000443728 411 ntBASIC5□□□□□ -1.61
CD40P25942 AC002553.2-201ENST00000453217 340 ntBASIC5□□□□□ -1.61
CD40P25942 FRG2FP-204ENST00000453982 852 ntBASIC5□□□□□ -1.61
CD40P25942 MTCO3P20-201ENST00000454926 688 ntBASIC5□□□□□ -1.61
CD40P25942 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 FAM133DP-201ENST00000464802 691 ntBASIC5□□□□□ -1.61
CD40P25942 AL672167.3-201ENST00000465951 960 ntBASIC5□□□□□ -1.61
CD40P25942 AC146507.1-201ENST00000468335 354 ntBASIC5□□□□□ -1.61
CD40P25942 AC009120.1-201ENST00000493458 473 ntBASIC5□□□□□ -1.61
CD40P25942 AL136038.1-201ENST00000497246 351 ntBASIC5□□□□□ -1.61
CD40P25942 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 RNF138P1-201ENST00000502765 546 ntBASIC5□□□□□ -1.61
CD40P25942 AC116353.2-201ENST00000505332 712 ntBASIC5□□□□□ -1.61
CD40P25942 PGBD4P4-201ENST00000509673 613 ntBASIC5□□□□□ -1.61
CD40P25942 AC016065.2-201ENST00000514530 444 ntBASIC5□□□□□ -1.61
CD40P25942 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CD40P25942 AC021678.3-201ENST00000517893 476 ntBASIC5□□□□□ -1.61
CD40P25942 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 AC090424.1-201ENST00000535243 736 ntBASIC5□□□□□ -1.61
CD40P25942 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 AC092470.1-201ENST00000546187 132 ntBASIC5□□□□□ -1.61
CD40P25942 CENPUP2-201ENST00000555897 1186 ntBASIC5□□□□□ -1.61
CD40P25942 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5□□□□□ -1.61
CD40P25942 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5□□□□□ -1.61
CD40P25942 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5□□□□□ -1.61
CD40P25942 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5□□□□□ -1.61
CD40P25942 RPL23AP92-201ENST00000603609 255 ntBASIC5□□□□□ -1.61
CD40P25942 AL592295.2-201ENST00000612578 206 ntBASIC5□□□□□ -1.61
CD40P25942 AC007014.2-201ENST00000615581 479 ntBASIC5□□□□□ -1.61
CD40P25942 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms