Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.34□□□□□ -1.87
CTLA4P16410 AC026368.1-201ENST00000614934 690 ntBASIC3.34□□□□□ -1.87
CTLA4P16410 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CTLA4P16410 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.34□□□□□ -1.87
CTLA4P16410 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.34□□□□□ -1.87
CTLA4P16410 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTLA4P16410 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CTLA4P16410 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CTLA4P16410 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.88
CTLA4P16410 AC134882.1-201ENST00000603738 1676 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 CR381670.1-201ENST00000624291 1693 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CTLA4P16410 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.33□□□□□ -1.88
CTLA4P16410 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.33□□□□□ -1.88
CTLA4P16410 RNA5SP283-201ENST00000365604 119 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 SOD2P1-201ENST00000396543 562 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.33□□□□□ -1.88
CTLA4P16410 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.33□□□□□ -1.88
CTLA4P16410 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.33□□□□□ -1.88
CTLA4P16410 MTCO3P20-201ENST00000454926 688 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 RN7SL385P-201ENST00000468873 276 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 RN7SL323P-201ENST00000494712 295 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.33□□□□□ -1.88
CTLA4P16410 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.33□□□□□ -1.88
CTLA4P16410 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.33□□□□□ -1.88
CTLA4P16410 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.33□□□□□ -1.88
CTLA4P16410 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 AC005255.1-201ENST00000593748 216 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 AL096803.3-201ENST00000609032 532 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 AC016957.2-201ENST00000616998 848 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 ZYXP1-201ENST00000617638 118 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 FP236240.3-201ENST00000623061 327 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 AC092159.4-201ENST00000624944 550 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 RNA5SP196-201ENST00000625967 102 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.33□□□□□ -1.88
CTLA4P16410 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.33□□□□□ -1.88
CTLA4P16410 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.33□□□□□ -1.88
CTLA4P16410 AP001486.2-201ENST00000561652 5113 ntBASIC3.33□□□□□ -1.88
CTLA4P16410 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.33□□□□□ -1.88
CTLA4P16410 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.33□□□□□ -1.88
CTLA4P16410 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTLA4P16410 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.32□□□□□ -1.88
CTLA4P16410 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
CTLA4P16410 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTLA4P16410 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CTLA4P16410 RPL31P52-201ENST00000407532 367 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.32□□□□□ -1.88
CTLA4P16410 MOB1AP1-201ENST00000430903 535 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 SKP1P1-201ENST00000438081 489 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.32□□□□□ -1.88
CTLA4P16410 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC010683.1-201ENST00000473673 378 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC010460.1-201ENST00000507087 466 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.32□□□□□ -1.88
CTLA4P16410 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 MIR2114-201ENST00000516645 80 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC006960.3-201ENST00000561845 705 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC025946.2-201ENST00000603398 234 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 AC123768.4-201ENST00000616244 701 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 OR6C71P-202ENST00000641886 1107 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CTLA4P16410 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 AC093311.1-201ENST00000506586 2021 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 SPATA2P1-201ENST00000431223 2055 ntBASIC3.32□□□□□ -1.88
CTLA4P16410 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.32□□□□□ -1.88
CTLA4P16410 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTLA4P16410 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms