Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXC4P09017 RNU6-891P-201ENST00000384280 111 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 RN7SKP27-201ENST00000410684 333 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC4P09017 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC4P09017 Z97055.1-201ENST00000419730 712 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.89□□□□□ -1.79
HOXC4P09017 MTCO1P54-201ENST00000430139 712 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC4P09017 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC4P09017 MTND3P4-201ENST00000453537 303 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC4P09017 AC106872.2-201ENST00000494303 480 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC4P09017 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC4P09017 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.89□□□□□ -1.79
HOXC4P09017 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC4P09017 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC4P09017 SAP18P1-201ENST00000512058 390 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AC087369.1-201ENST00000520775 996 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.89□□□□□ -1.79
HOXC4P09017 AC018552.3-201ENST00000567416 561 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AC107982.3-201ENST00000584957 985 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 BNIP3P7-201ENST00000605641 516 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AC012467.1-201ENST00000607740 256 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 OR6R2P-201ENST00000609216 300 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC4P09017 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
HOXC4P09017 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HOXC4P09017 MAPK10-253ENST00000641010 4072 ntBASIC3.89□□□□□ -1.79
HOXC4P09017 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.89□□□□□ -1.79
HOXC4P09017 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC4P09017 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC4P09017 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HOXC4P09017 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 RNU6-670P-201ENST00000364312 104 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 CYCSP19-201ENST00000411715 316 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC4P09017 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 MTCO3P21-201ENST00000430791 643 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 RPS20P1-201ENST00000434853 354 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 RPL12P46-201ENST00000436610 195 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 HMGB1P37-201ENST00000439613 609 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 NDUFS5P3-201ENST00000450668 321 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 S100A11P1-201ENST00000477525 312 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 METTL15P1-201ENST00000481421 1045 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 RN7SL323P-201ENST00000494712 295 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 RFPL1S-203ENST00000539579 330 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC067805.1-201ENST00000559344 470 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 AC092574.1-201ENST00000609771 420 ntBASIC3.88□□□□□ -1.79
HOXC4P09017 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HOXC4P09017 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXC4P09017 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXC4P09017 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 ASNSP1-204ENST00000641977 1664 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXC4P09017 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXC4P09017 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXC4P09017 AC011155.1-201ENST00000316512 456 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 RNU1-85P-201ENST00000364127 164 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 RNU6-304P-201ENST00000364855 107 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXC4P09017 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 RN7SKP222-201ENST00000410651 315 ntBASIC3.87□□□□□ -1.79
HOXC4P09017 RNU6-603P-201ENST00000411403 107 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms