Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SNORA71B-202ENST00000439232 272 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.13□□□□□ -1.91
CTSDP07339 HMGB3P8-201ENST00000449709 577 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AP002371.1-201ENST00000463604 433 ntBASIC3.13□□□□□ -1.91
CTSDP07339 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 MRPL49P2-201ENST00000521066 465 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AP003730.1-201ENST00000524605 285 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 AC022146.1-201ENST00000595307 847 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 VN1R81P-201ENST00000602085 372 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AC083899.3-201ENST00000603413 594 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AL592436.1-201ENST00000605135 558 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AL365503.1-201ENST00000605247 905 ntBASIC3.13□□□□□ -1.91
CTSDP07339 AL354760.1-201ENST00000608357 643 ntBASIC3.13□□□□□ -1.91
CTSDP07339 C2orf27A-204ENST00000623058 969 ntBASIC3.13□□□□□ -1.91
CTSDP07339 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CTSDP07339 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTSDP07339 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.13□□□□□ -1.91
CTSDP07339 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
CTSDP07339 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CTSDP07339 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
CTSDP07339 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSDP07339 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSDP07339 AL049693.1-201ENST00000402760 611 ntBASIC3.12□□□□□ -1.91
CTSDP07339 RNU6-233P-201ENST00000410845 141 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSDP07339 Z97055.1-201ENST00000419730 712 ntBASIC3.12□□□□□ -1.91
CTSDP07339 OSTCP5-201ENST00000425293 453 ntBASIC3.12□□□□□ -1.91
CTSDP07339 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSDP07339 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSDP07339 TPT1P12-201ENST00000448968 492 ntBASIC3.12□□□□□ -1.91
CTSDP07339 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTSDP07339 AC099563.1-201ENST00000456086 418 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AP000893.1-201ENST00000474462 794 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSDP07339 RPS3AP6-201ENST00000484430 795 ntBASIC3.12□□□□□ -1.91
CTSDP07339 ACTG1P13-201ENST00000486987 1043 ntBASIC3.12□□□□□ -1.91
CTSDP07339 TRAV31-201ENST00000502780 342 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSDP07339 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.12□□□□□ -1.91
CTSDP07339 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTSDP07339 NDUFA5P2-201ENST00000519723 344 ntBASIC3.12□□□□□ -1.91
CTSDP07339 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.12□□□□□ -1.91
CTSDP07339 AC006960.3-201ENST00000561845 705 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.12□□□□□ -1.91
CTSDP07339 AL163642.2-201ENST00000604722 1019 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AC092653.1-201ENST00000608509 531 ntBASIC3.12□□□□□ -1.91
CTSDP07339 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.12□□□□□ -1.91
CTSDP07339 MIR6716-201ENST00000613413 80 ntBASIC3.12□□□□□ -1.91
CTSDP07339 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.12□□□□□ -1.91
CTSDP07339 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTSDP07339 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.12□□□□□ -1.91
CTSDP07339 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTSDP07339 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.12□□□□□ -1.91
CTSDP07339 SPATA2P1-201ENST00000431223 2055 ntBASIC3.12□□□□□ -1.91
CTSDP07339 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CTSDP07339 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CTSDP07339 RPS27AP11-201ENST00000402798 447 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AL136116.1-201ENST00000403591 381 ntBASIC3.11□□□□□ -1.91
CTSDP07339 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.11□□□□□ -1.91
CTSDP07339 HMGB3P20-201ENST00000417997 600 ntBASIC3.11□□□□□ -1.91
CTSDP07339 TCEA1P2-201ENST00000420496 906 ntBASIC3.11□□□□□ -1.91
CTSDP07339 MRPL50P1-201ENST00000431951 384 ntBASIC3.11□□□□□ -1.91
CTSDP07339 TBCAP1-201ENST00000436520 327 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSDP07339 RPL23AP14-201ENST00000468281 468 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSDP07339 RN7SKP122-201ENST00000515923 296 ntBASIC3.11□□□□□ -1.91
CTSDP07339 RNA5SP164-201ENST00000516533 110 ntBASIC3.11□□□□□ -1.91
CTSDP07339 IGKV2D-10-201ENST00000520194 281 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSDP07339 AL121766.1-201ENST00000547436 487 ntBASIC3.11□□□□□ -1.91
CTSDP07339 TGIF1P1-201ENST00000558095 802 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSDP07339 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSDP07339 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSDP07339 AL049634.3-201ENST00000604968 457 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AC079684.1-201ENST00000621405 437 ntBASIC3.11□□□□□ -1.91
CTSDP07339 AC073530.2-201ENST00000623987 261 ntBASIC3.11□□□□□ -1.91
CTSDP07339 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.11□□□□□ -1.91
CTSDP07339 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.11□□□□□ -1.91
CTSDP07339 CDRT1-208ENST00000630868 794 ntBASIC3.11□□□□□ -1.91
CTSDP07339 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.11□□□□□ -1.91
CTSDP07339 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CTSDP07339 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms