Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC012417.1-201ENST00000582307 1039 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC110743.1-201ENST00000584870 478 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 QTRT1P1-201ENST00000604344 1078 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC023813.4-201ENST00000607580 580 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 MIR6868-201ENST00000611215 58 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC039056.2-201ENST00000622261 511 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC00561-201ENST00000565815 2738 ntBASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC134882.1-201ENST00000603738 1676 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RNU6-1331P-201ENST00000363658 106 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RN7SKP156-201ENST00000410308 342 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPL37P1-201ENST00000432310 284 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 YWHAQP9-201ENST00000445891 512 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RAD1P2-201ENST00000446414 663 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RAD23BP3-201ENST00000454157 1152 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPL21P11-201ENST00000461458 483 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS20P21-201ENST00000466859 343 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AGGF1P3-201ENST00000493675 1213 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 RN7SKP157-201ENST00000516174 282 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 snoU109.6-201ENST00000516831 118 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC092851.1-201ENST00000535964 478 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 GMCL1P2-201ENST00000605230 823 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 BX322635.1-201ENST00000605804 496 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 HSPD1P11-201ENST00000508643 1702 ntBASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.87□□□□□ -1.79
TMX2-CTNND1H3BSU7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR4A15-201ENST00000314706 1035 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 MIR365B-201ENST00000362317 111 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 Y_RNA.62-201ENST00000362840 99 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 CRYBB2P1-203ENST00000415709 538 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC096644.3-201ENST00000416788 338 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 CYP4F29P-201ENST00000420685 446 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL445584.1-201ENST00000431451 330 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC022431.1-201ENST00000450941 438 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 MTND2P3-201ENST00000452458 470 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 ACTR3P3-201ENST00000480448 893 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 NARSP2-201ENST00000518524 679 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 TRMT10BP1-201ENST00000519377 943 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC026616.1-201ENST00000523157 525 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 FAM60CP-201ENST00000591086 664 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AL451044.1-201ENST00000604867 238 ntBASIC3.86□□□□□ -1.79
TMX2-CTNND1H3BSU7 AC100814.1-201ENST00000606963 623 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms