Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col13a1Q9R1N9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Gm7862-201ENSMUST00000121461 292 ntBASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col13a1Q9R1N9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col13a1Q9R1N9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col13a1Q9R1N9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col13a1Q9R1N9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14□□□□□ -0.17
Col13a1Q9R1N9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col13a1Q9R1N9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14□□□□□ -0.17
Col13a1Q9R1N9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms