Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Six6Q9QZ28 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Six6Q9QZ28 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six6Q9QZ28 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six6Q9QZ28 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six6Q9QZ28 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six6Q9QZ28 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.15
Six6Q9QZ28 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Six6Q9QZ28 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Nespas-201ENSMUST00000143738 1083 ntBASIC14.08□□□□□ -0.16
Six6Q9QZ28 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.08□□□□□ -0.16
Six6Q9QZ28 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.08□□□□□ -0.16
Six6Q9QZ28 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Sybu-209ENSMUST00000228639 4113 ntBASIC14.08□□□□□ -0.16
Six6Q9QZ28 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.08□□□□□ -0.16
Six6Q9QZ28 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six6Q9QZ28 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.07□□□□□ -0.16
Six6Q9QZ28 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Gm38285-201ENSMUST00000192928 922 ntBASIC14.07□□□□□ -0.16
Six6Q9QZ28 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six6Q9QZ28 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms