Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn3Q9ES97 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rtn3Q9ES97 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Gm18101-201ENSMUST00000215769 548 ntBASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rtn3Q9ES97 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Gm18032-201ENSMUST00000222541 538 ntBASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rtn3Q9ES97 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.6■□□□□ 0.41
Rtn3Q9ES97 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rtn3Q9ES97 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Gm18958-201ENSMUST00000174258 762 ntBASIC17.59■□□□□ 0.41
Rtn3Q9ES97 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rtn3Q9ES97 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms