Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mbd3l1Q9D9H3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Mbd3l1Q9D9H3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Mbd3l1Q9D9H3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Mbd3l1Q9D9H3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mbd3l1Q9D9H3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms