Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Gm6659-201ENSMUST00000174752 547 ntBASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Gm18032-201ENSMUST00000222541 538 ntBASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Clca1Q9D7Z6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Il3ra-202ENSMUST00000223589 738 ntBASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Clca1Q9D7Z6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Gm16061-201ENSMUST00000122167 857 ntBASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clca1Q9D7Z6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Gm10013-201ENSMUST00000106074 672 ntBASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clca1Q9D7Z6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clca1Q9D7Z6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms