Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.14■□□□□ 0.49
Cfap53Q9D439 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap53Q9D439 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Gm13186-201ENSMUST00000118031 316 ntBASIC18.13■□□□□ 0.49
Cfap53Q9D439 Gm6433-201ENSMUST00000118634 875 ntBASIC18.13■□□□□ 0.49
Cfap53Q9D439 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.13■□□□□ 0.49
Cfap53Q9D439 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap53Q9D439 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.12■□□□□ 0.49
Cfap53Q9D439 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.12■□□□□ 0.49
Cfap53Q9D439 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap53Q9D439 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.11■□□□□ 0.49
Cfap53Q9D439 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Actl10-202ENSMUST00000226583 1501 ntBASIC18.11■□□□□ 0.49
Cfap53Q9D439 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.11■□□□□ 0.49
Cfap53Q9D439 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.11■□□□□ 0.49
Cfap53Q9D439 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cfap53Q9D439 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Mir1668-201ENSMUST00000184114 107 ntBASIC18.1■□□□□ 0.49
Cfap53Q9D439 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap53Q9D439 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap53Q9D439 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap53Q9D439 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cfap53Q9D439 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cfap53Q9D439 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms