Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc3Q9CW03 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Dancr-204ENSMUST00000132389 2347 ntBASIC19.47■□□□□ 0.71
Smc3Q9CW03 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc3Q9CW03 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smc3Q9CW03 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smc3Q9CW03 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.44■□□□□ 0.7
Smc3Q9CW03 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smc3Q9CW03 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.43■□□□□ 0.7
Smc3Q9CW03 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.43■□□□□ 0.7
Smc3Q9CW03 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smc3Q9CW03 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smc3Q9CW03 Gm715-201ENSMUST00000117865 831 ntBASIC19.42■□□□□ 0.7
Smc3Q9CW03 Odf3b-204ENSMUST00000227834 930 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms