Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retreg3Q9CQV4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retreg3Q9CQV4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Gm14716-201ENSMUST00000120138 718 ntBASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retreg3Q9CQV4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Gm11355-201ENSMUST00000121120 306 ntBASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Ank2-226ENSMUST00000189368 339 ntBASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retreg3Q9CQV4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retreg3Q9CQV4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms