Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
H2afb1Q9CQ70 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
H2afb1Q9CQ70 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H2afb1Q9CQ70 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Gm13186-201ENSMUST00000118031 316 ntBASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Actl10-202ENSMUST00000226583 1501 ntBASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H2afb1Q9CQ70 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H2afb1Q9CQ70 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H2afb1Q9CQ70 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms