Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Gm7791-201ENSMUST00000219066 539 ntBASIC16.2■□□□□ 0.18
Trim16Q99PP9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.2■□□□□ 0.18
Trim16Q99PP9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm11539-201ENSMUST00000119837 557 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm13436-201ENSMUST00000120418 567 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim16Q99PP9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.19■□□□□ 0.18
Trim16Q99PP9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim16Q99PP9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.18■□□□□ 0.18
Trim16Q99PP9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Gm27463-201ENSMUST00000183569 57 ntBASIC16.18■□□□□ 0.18
Trim16Q99PP9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.18■□□□□ 0.18
Trim16Q99PP9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim16Q99PP9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Gm43799-201ENSMUST00000201845 579 ntBASIC16.17■□□□□ 0.18
Trim16Q99PP9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.17■□□□□ 0.18
Trim16Q99PP9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim16Q99PP9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.16■□□□□ 0.18
Trim16Q99PP9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.16■□□□□ 0.18
Trim16Q99PP9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim16Q99PP9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim16Q99PP9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms