Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.03■□□□□ 0.64
Smc1bQ920F6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc1bQ920F6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.02■□□□□ 0.64
Smc1bQ920F6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc1bQ920F6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc1bQ920F6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.01■□□□□ 0.63
Smc1bQ920F6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.01■□□□□ 0.63
Smc1bQ920F6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smc1bQ920F6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19■□□□□ 0.63
Smc1bQ920F6 Gm11452-201ENSMUST00000122376 690 ntBASIC19■□□□□ 0.63
Smc1bQ920F6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Gm43073-201ENSMUST00000198200 1189 ntBASIC19■□□□□ 0.63
Smc1bQ920F6 Gm18206-201ENSMUST00000207027 926 ntBASIC19■□□□□ 0.63
Smc1bQ920F6 AC132104.2-201ENSMUST00000215011 266 ntBASIC19■□□□□ 0.63
Smc1bQ920F6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19■□□□□ 0.63
Smc1bQ920F6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19■□□□□ 0.63
Smc1bQ920F6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc1bQ920F6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Gm10052-201ENSMUST00000168019 960 ntBASIC18.99■□□□□ 0.63
Smc1bQ920F6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Gm7729-201ENSMUST00000050143 801 ntBASIC18.99■□□□□ 0.63
Smc1bQ920F6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc1bQ920F6 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.98■□□□□ 0.63
Smc1bQ920F6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms