Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga11Q91XY8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga11Q91XY8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga11Q91XY8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhga11Q91XY8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhga11Q91XY8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Gm27463-201ENSMUST00000183569 57 ntBASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.97■□□□□ 0.15
Pcdhga11Q91XY8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhga11Q91XY8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga11Q91XY8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga11Q91XY8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhga11Q91XY8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdhga11Q91XY8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhga11Q91XY8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhga11Q91XY8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms