Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhgb4Q91XX6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb4Q91XX6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhgb4Q91XX6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Pcdhgb4Q91XX6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gm10566-201ENSMUST00000086739 996 ntBASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhgb4Q91XX6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gm13186-201ENSMUST00000118031 316 ntBASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhgb4Q91XX6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Gm13559-201ENSMUST00000120476 863 ntBASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhgb4Q91XX6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Gm2274-201ENSMUST00000184539 609 ntBASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhgb4Q91XX6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms