Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Snx9Q91VH2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx9Q91VH2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx9Q91VH2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.41■□□□□ 0.38
Snx9Q91VH2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Snx9Q91VH2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Snx9Q91VH2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.4■□□□□ 0.38
Snx9Q91VH2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Snx9Q91VH2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.39■□□□□ 0.38
Snx9Q91VH2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Snx9Q91VH2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Snx9Q91VH2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Snx9Q91VH2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Snx9Q91VH2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.39■□□□□ 0.37
Snx9Q91VH2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Snx9Q91VH2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.38■□□□□ 0.37
Snx9Q91VH2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.38■□□□□ 0.37
Snx9Q91VH2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.38■□□□□ 0.37
Snx9Q91VH2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Snx9Q91VH2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Gm10819-201ENSMUST00000099988 561 ntBASIC17.37■□□□□ 0.37
Snx9Q91VH2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Snx9Q91VH2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Snx9Q91VH2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.36■□□□□ 0.37
Snx9Q91VH2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.36■□□□□ 0.37
Snx9Q91VH2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Snx9Q91VH2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx9Q91VH2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx9Q91VH2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.35■□□□□ 0.37
Snx9Q91VH2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Snx9Q91VH2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms