Protein–RNA interactions for Protein: Q91VB4

Hps3, Hermansky-Pudlak syndrome 3 protein homolog, mousemouse

Predictions only

Length 1,002 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps3Q91VB4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps3Q91VB4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps3Q91VB4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hps3Q91VB4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps3Q91VB4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.68■□□□□ 0.58
Hps3Q91VB4 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps3Q91VB4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm11539-201ENSMUST00000119837 557 ntBASIC18.67■□□□□ 0.58
Hps3Q91VB4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Gm10566-201ENSMUST00000086739 996 ntBASIC18.67■□□□□ 0.58
Hps3Q91VB4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Actl10-202ENSMUST00000226583 1501 ntBASIC18.67■□□□□ 0.58
Hps3Q91VB4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps3Q91VB4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.66■□□□□ 0.58
Hps3Q91VB4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hps3Q91VB4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.65■□□□□ 0.58
Hps3Q91VB4 Gm13436-201ENSMUST00000120418 567 ntBASIC18.65■□□□□ 0.58
Hps3Q91VB4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Gm37055-201ENSMUST00000191866 133 ntBASIC18.65■□□□□ 0.58
Hps3Q91VB4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Gm30025-201ENSMUST00000218555 728 ntBASIC18.65■□□□□ 0.58
Hps3Q91VB4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hps3Q91VB4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hps3Q91VB4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hps3Q91VB4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hps3Q91VB4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hps3Q91VB4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms