Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Gm25745-201ENSMUST00000174945 133 ntBASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cspg4Q8VHY0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Gm27628-201ENSMUST00000184911 107 ntBASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cspg4Q8VHY0 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Mir7023-201ENSMUST00000185093 64 ntBASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cspg4Q8VHY0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg4Q8VHY0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Mir6977-201ENSMUST00000184960 64 ntBASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg4Q8VHY0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms