Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdh18Q8VHR0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Gm6576-201ENSMUST00000169678 883 ntBASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdh18Q8VHR0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Gm20049-201ENSMUST00000219950 730 ntBASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdh18Q8VHR0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Gm27275-201ENSMUST00000184318 272 ntBASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.96■□□□□ 0.15
Pcdh18Q8VHR0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdh18Q8VHR0 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh18Q8VHR0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Pcdh18Q8VHR0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh18Q8VHR0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh18Q8VHR0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms