Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smg8Q8VE18 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smg8Q8VE18 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smg8Q8VE18 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smg8Q8VE18 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.6■□□□□ 0.41
Smg8Q8VE18 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smg8Q8VE18 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Gm12644-201ENSMUST00000119935 606 ntBASIC17.59■□□□□ 0.41
Smg8Q8VE18 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.59■□□□□ 0.41
Smg8Q8VE18 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Smg8Q8VE18 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Gm27867-201ENSMUST00000184778 125 ntBASIC17.59■□□□□ 0.41
Smg8Q8VE18 Gm28659-201ENSMUST00000188013 759 ntBASIC17.59■□□□□ 0.41
Smg8Q8VE18 Mzt1-203ENSMUST00000227948 952 ntBASIC17.59■□□□□ 0.41
Smg8Q8VE18 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.59■□□□□ 0.41
Smg8Q8VE18 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Smg8Q8VE18 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.58■□□□□ 0.41
Smg8Q8VE18 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Gm13884-201ENSMUST00000118103 829 ntBASIC17.58■□□□□ 0.4
Smg8Q8VE18 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Smg8Q8VE18 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Gm44454-201ENSMUST00000198541 138 ntBASIC17.58■□□□□ 0.4
Smg8Q8VE18 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Smg8Q8VE18 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Mir8098-201ENSMUST00000184011 137 ntBASIC17.57■□□□□ 0.4
Smg8Q8VE18 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.57■□□□□ 0.4
Smg8Q8VE18 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.57■□□□□ 0.4
Smg8Q8VE18 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.57■□□□□ 0.4
Smg8Q8VE18 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Smg8Q8VE18 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Gm15165-201ENSMUST00000118140 502 ntBASIC17.56■□□□□ 0.4
Smg8Q8VE18 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.56■□□□□ 0.4
Smg8Q8VE18 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.56■□□□□ 0.4
Smg8Q8VE18 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smg8Q8VE18 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Smg8Q8VE18 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms