Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ndc1Q8VCB1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Gm13186-201ENSMUST00000118031 316 ntBASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Gm45328-201ENSMUST00000210942 917 ntBASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ndc1Q8VCB1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Phf7-203ENSMUST00000226565 1971 ntBASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gm28033-201ENSMUST00000184224 96 ntBASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gm27742-201ENSMUST00000184667 60 ntBASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ndc1Q8VCB1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Gm18669-201ENSMUST00000216049 778 ntBASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.59■□□□□ 0.09
Ndc1Q8VCB1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ndc1Q8VCB1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Mir3081-201ENSMUST00000175305 84 ntBASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ndc1Q8VCB1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms