Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.58■□□□□ 0.24
Vps39Q8R5L3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Gm27011-201ENSMUST00000182352 972 ntBASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.57■□□□□ 0.24
Vps39Q8R5L3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vps39Q8R5L3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vps39Q8R5L3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Vps39Q8R5L3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Vps39Q8R5L3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms