Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rpp40Q8R1F9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rpp40Q8R1F9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rpp40Q8R1F9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rpp40Q8R1F9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.7■□□□□ 0.42
Rpp40Q8R1F9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp40Q8R1F9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Gm13216-201ENSMUST00000117145 591 ntBASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Gm10052-201ENSMUST00000168019 960 ntBASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Gm17807-201ENSMUST00000186869 298 ntBASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Gm7729-201ENSMUST00000050143 801 ntBASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp40Q8R1F9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Mir3081-201ENSMUST00000175305 84 ntBASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Gm27357-201ENSMUST00000183754 135 ntBASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp40Q8R1F9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms