Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx54Q8K4L0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Gm13616-201ENSMUST00000120600 222 ntBASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx54Q8K4L0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx54Q8K4L0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Gm5253-201ENSMUST00000187104 1025 ntBASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Gm20949-201ENSMUST00000206478 952 ntBASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 AC124549.3-201ENSMUST00000225541 367 ntBASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ddx54Q8K4L0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Gm9172-201ENSMUST00000212092 954 ntBASIC21.58■■□□□ 1.05
Ddx54Q8K4L0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx54Q8K4L0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx54Q8K4L0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.58■■□□□ 1.04
Ddx54Q8K4L0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ddx54Q8K4L0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ddx54Q8K4L0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx54Q8K4L0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx54Q8K4L0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms