Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ebf4Q8K4J2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 App-207ENSMUST00000227737 2827 ntBASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.13■□□□□ 0.01
Ebf4Q8K4J2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Gm6576-201ENSMUST00000169678 883 ntBASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.12■□□□□ 0.01
Ebf4Q8K4J2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ebf4Q8K4J2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Gm44549-201ENSMUST00000208351 577 ntBASIC15.1■□□□□ 0.01
Ebf4Q8K4J2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms