Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col23a1Q8K4G2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Gm4899-201ENSMUST00000178708 719 ntBASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Gm17968-201ENSMUST00000194902 784 ntBASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col23a1Q8K4G2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Gm18622-201ENSMUST00000219361 595 ntBASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.03■□□□□ 0.8
Col23a1Q8K4G2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.02■□□□□ 0.8
Col23a1Q8K4G2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col23a1Q8K4G2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col23a1Q8K4G2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Gm27494-201ENSMUST00000184735 189 ntBASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col23a1Q8K4G2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20■□□□□ 0.79
Col23a1Q8K4G2 AC154572.2-201ENSMUST00000225105 997 ntBASIC20■□□□□ 0.79
Col23a1Q8K4G2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20■□□□□ 0.79
Col23a1Q8K4G2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col23a1Q8K4G2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Mir1895-201ENSMUST00000122615 79 ntBASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Gm5745-201ENSMUST00000183748 313 ntBASIC19.99■□□□□ 0.79
Col23a1Q8K4G2 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms