Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clrn1Q8K445 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.62■□□□□ 0.09
Clrn1Q8K445 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.62■□□□□ 0.09
Clrn1Q8K445 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.62■□□□□ 0.09
Clrn1Q8K445 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Clrn1Q8K445 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.61■□□□□ 0.09
Clrn1Q8K445 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.61■□□□□ 0.09
Clrn1Q8K445 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gm22697-201ENSMUST00000175194 63 ntBASIC15.61■□□□□ 0.09
Clrn1Q8K445 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gm27389-201ENSMUST00000183622 195 ntBASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gm18101-201ENSMUST00000215769 548 ntBASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Clrn1Q8K445 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.6■□□□□ 0.09
Clrn1Q8K445 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Gm26039-201ENSMUST00000158152 144 ntBASIC15.6■□□□□ 0.09
Clrn1Q8K445 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Clrn1Q8K445 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.59■□□□□ 0.09
Clrn1Q8K445 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.59■□□□□ 0.09
Clrn1Q8K445 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Gm13216-201ENSMUST00000117145 591 ntBASIC15.59■□□□□ 0.09
Clrn1Q8K445 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.59■□□□□ 0.09
Clrn1Q8K445 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Clrn1Q8K445 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms