Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Mir6404-201ENSMUST00000183699 94 ntBASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rp1l1Q8CGM2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rp1l1Q8CGM2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Gm8396-201ENSMUST00000057361 823 ntBASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Gm8825-201ENSMUST00000182565 998 ntBASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Gm5186-201ENSMUST00000218781 920 ntBASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rp1l1Q8CGM2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rp1l1Q8CGM2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Gm27494-201ENSMUST00000184735 189 ntBASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rp1l1Q8CGM2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Rp1l1Q8CGM2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rp1l1Q8CGM2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rp1l1Q8CGM2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rp1l1Q8CGM2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rp1l1Q8CGM2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.08■□□□□ 0.32
Rp1l1Q8CGM2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Gm5312-201ENSMUST00000203728 547 ntBASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rp1l1Q8CGM2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms