Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Polr2bQ8CFI7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Polr2bQ8CFI7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2bQ8CFI7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2bQ8CFI7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2bQ8CFI7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Polr2bQ8CFI7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Polr2bQ8CFI7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Gm21362-201ENSMUST00000194272 928 ntBASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Polr2bQ8CFI7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Gm7284-201ENSMUST00000131667 944 ntBASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Polr2bQ8CFI7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Polr2bQ8CFI7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms