Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb7Q8CDY9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Gm30025-201ENSMUST00000218555 728 ntBASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb7Q8CDY9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb7Q8CDY9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Gm15823-201ENSMUST00000064305 670 ntBASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb7Q8CDY9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb7Q8CDY9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb7Q8CDY9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb7Q8CDY9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb7Q8CDY9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb7Q8CDY9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb7Q8CDY9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb7Q8CDY9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb7Q8CDY9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms