Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Gm4535-201ENSMUST00000182274 558 ntBASIC20.37■□□□□ 0.85
Trim52Q8CDV4 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Gm10355-201ENSMUST00000097146 517 ntBASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim52Q8CDV4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm25990-201ENSMUST00000102440 86 ntBASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm12350-201ENSMUST00000121208 462 ntBASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm12497-201ENSMUST00000138778 237 ntBASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm25406-201ENSMUST00000157599 105 ntBASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim52Q8CDV4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Gm13418-201ENSMUST00000119097 944 ntBASIC20.35■□□□□ 0.85
Trim52Q8CDV4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Gm27525-201ENSMUST00000184465 107 ntBASIC20.35■□□□□ 0.85
Trim52Q8CDV4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim52Q8CDV4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Gm4459-201ENSMUST00000118750 468 ntBASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim52Q8CDV4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim52Q8CDV4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim52Q8CDV4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim52Q8CDV4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Trim52Q8CDV4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim52Q8CDV4 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim52Q8CDV4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms