Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Lysmd4Q8CC84 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Lysmd4Q8CC84 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Lysmd4Q8CC84 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Gm9731-201ENSMUST00000209480 747 ntBASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Lysmd4Q8CC84 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.83□□□□□ -0.03
Lysmd4Q8CC84 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms