Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rfx6Q8C7R7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.83■□□□□ 0.29
Rfx6Q8C7R7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx6Q8C7R7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx6Q8C7R7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Rfx6Q8C7R7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx6Q8C7R7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rfx6Q8C7R7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.83■□□□□ 0.28
Rfx6Q8C7R7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Gm38027-201ENSMUST00000192315 235 ntBASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rfx6Q8C7R7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Il3ra-202ENSMUST00000223589 738 ntBASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rfx6Q8C7R7 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms