Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim47Q8C0E3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Mir3081-201ENSMUST00000175305 84 ntBASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Gm28033-201ENSMUST00000184224 96 ntBASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim47Q8C0E3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim47Q8C0E3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim47Q8C0E3 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Gm27357-201ENSMUST00000183754 135 ntBASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim47Q8C0E3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim47Q8C0E3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim47Q8C0E3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms