Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim35Q8C006 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Mir669l-201ENSMUST00000103771 98 ntBASIC17.21■□□□□ 0.35
Trim35Q8C006 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Gm22032-201ENSMUST00000116946 116 ntBASIC17.21■□□□□ 0.35
Trim35Q8C006 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Mir5122-201ENSMUST00000175004 89 ntBASIC17.21■□□□□ 0.35
Trim35Q8C006 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.21■□□□□ 0.35
Trim35Q8C006 Gm43452-201ENSMUST00000201873 991 ntBASIC17.21■□□□□ 0.35
Trim35Q8C006 Gm44845-201ENSMUST00000208773 335 ntBASIC17.21■□□□□ 0.35
Trim35Q8C006 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim35Q8C006 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim35Q8C006 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.21■□□□□ 0.34
Trim35Q8C006 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim35Q8C006 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim35Q8C006 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Gm11643-201ENSMUST00000119578 864 ntBASIC17.2■□□□□ 0.34
Trim35Q8C006 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim35Q8C006 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim35Q8C006 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Trim35Q8C006 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim35Q8C006 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim35Q8C006 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Gm12382-201ENSMUST00000122005 922 ntBASIC17.19■□□□□ 0.34
Trim35Q8C006 Gm37055-201ENSMUST00000191866 133 ntBASIC17.19■□□□□ 0.34
Trim35Q8C006 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.19■□□□□ 0.34
Trim35Q8C006 Gm42438-201ENSMUST00000197832 974 ntBASIC17.19■□□□□ 0.34
Trim35Q8C006 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim35Q8C006 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim35Q8C006 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Trim35Q8C006 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim35Q8C006 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim35Q8C006 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim35Q8C006 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.18■□□□□ 0.34
Trim35Q8C006 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms