Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc44a2Q8BY89 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
Slc44a2Q8BY89 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc44a2Q8BY89 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc44a2Q8BY89 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc44a2Q8BY89 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Slc44a2Q8BY89 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc44a2Q8BY89 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Gm13168-201ENSMUST00000121771 632 ntBASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slc44a2Q8BY89 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Gm42545-201ENSMUST00000202755 922 ntBASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Gm18025-201ENSMUST00000221733 862 ntBASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Slc44a2Q8BY89 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Slc44a2Q8BY89 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc44a2Q8BY89 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc44a2Q8BY89 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc44a2Q8BY89 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Slc44a2Q8BY89 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Gm8520-201ENSMUST00000186517 868 ntBASIC16.08■□□□□ 0.16
Slc44a2Q8BY89 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms