Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nhlrc1Q8BR37 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Gm11336-201ENSMUST00000118168 334 ntBASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nhlrc1Q8BR37 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm13186-201ENSMUST00000118031 316 ntBASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm27000-201ENSMUST00000182943 842 ntBASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm18115-201ENSMUST00000221209 621 ntBASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Nhlrc1Q8BR37 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Nhlrc1Q8BR37 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nhlrc1Q8BR37 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nhlrc1Q8BR37 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nhlrc1Q8BR37 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nhlrc1Q8BR37 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms