Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rab11fip4Q8BQP8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Gm18958-201ENSMUST00000174258 762 ntBASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rab11fip4Q8BQP8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Gm7284-201ENSMUST00000131667 944 ntBASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rab11fip4Q8BQP8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Gm9013-201ENSMUST00000132939 882 ntBASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Gm5587-201ENSMUST00000206270 674 ntBASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rab11fip4Q8BQP8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rab11fip4Q8BQP8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rab11fip4Q8BQP8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rab11fip4Q8BQP8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms