Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smco3Q8BQM7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Zfp783-201ENSMUST00000095946 670 ntBASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smco3Q8BQM7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Gm10493-201ENSMUST00000097270 612 ntBASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Flg-201ENSMUST00000050758 1488 ntBASIC13.67□□□□□ -0.22
Smco3Q8BQM7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smco3Q8BQM7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.65□□□□□ -0.22
Smco3Q8BQM7 Mir2861-201ENSMUST00000175539 82 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms