Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Samm50Q8BGH2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Samm50Q8BGH2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Gm2274-201ENSMUST00000184539 609 ntBASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Samm50Q8BGH2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samm50Q8BGH2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Samm50Q8BGH2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Samm50Q8BGH2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Gm18959-201ENSMUST00000208954 655 ntBASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Gm7791-201ENSMUST00000219066 539 ntBASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.39■□□□□ 0.69
Samm50Q8BGH2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Gm10231-201ENSMUST00000181584 441 ntBASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Gm10175-202ENSMUST00000208752 441 ntBASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Gm9731-201ENSMUST00000209480 747 ntBASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Samm50Q8BGH2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms