Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm3375-201ENSMUST00000203929 796 ntBASIC16■□□□□ 0.15
Trim36Q80WG7 AC121577.1-201ENSMUST00000227302 707 ntBASIC16■□□□□ 0.15
Trim36Q80WG7 Odf3b-204ENSMUST00000227834 930 ntBASIC16■□□□□ 0.15
Trim36Q80WG7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16■□□□□ 0.15
Trim36Q80WG7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trim36Q80WG7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Timm23-208ENSMUST00000226683 750 ntBASIC15.99■□□□□ 0.15
Trim36Q80WG7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trim36Q80WG7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Gm10231-201ENSMUST00000181584 441 ntBASIC15.98■□□□□ 0.15
Trim36Q80WG7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Gm10175-202ENSMUST00000208752 441 ntBASIC15.98■□□□□ 0.15
Trim36Q80WG7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.98■□□□□ 0.15
Trim36Q80WG7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trim36Q80WG7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.97■□□□□ 0.15
Trim36Q80WG7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.97■□□□□ 0.15
Trim36Q80WG7 Gm11539-201ENSMUST00000119837 557 ntBASIC15.97■□□□□ 0.15
Trim36Q80WG7 Gm13436-201ENSMUST00000120418 567 ntBASIC15.97■□□□□ 0.15
Trim36Q80WG7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trim36Q80WG7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms