Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Prpf40bQ80W14 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Prpf40bQ80W14 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Gm1401-201ENSMUST00000122048 772 ntBASIC19.03■□□□□ 0.64
Prpf40bQ80W14 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf40bQ80W14 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf40bQ80W14 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf40bQ80W14 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf40bQ80W14 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Gm8000-201ENSMUST00000188378 592 ntBASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Gm2213-201ENSMUST00000197485 688 ntBASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf40bQ80W14 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19■□□□□ 0.63
Prpf40bQ80W14 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf40bQ80W14 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms