Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm13216-201ENSMUST00000117145 591 ntBASIC17.12■□□□□ 0.33
Trim62Q80V85 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim62Q80V85 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trim62Q80V85 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim62Q80V85 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trim62Q80V85 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trim62Q80V85 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Trim62Q80V85 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim62Q80V85 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.11■□□□□ 0.33
Trim62Q80V85 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim62Q80V85 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim62Q80V85 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim62Q80V85 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim62Q80V85 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim62Q80V85 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trim62Q80V85 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim62Q80V85 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim62Q80V85 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.1■□□□□ 0.33
Trim62Q80V85 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Trim62Q80V85 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.1■□□□□ 0.33
Trim62Q80V85 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim62Q80V85 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim62Q80V85 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim62Q80V85 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Gm14859-201ENSMUST00000117752 357 ntBASIC17.09■□□□□ 0.33
Trim62Q80V85 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Gm10052-201ENSMUST00000168019 960 ntBASIC17.09■□□□□ 0.33
Trim62Q80V85 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.09■□□□□ 0.33
Trim62Q80V85 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Gm7729-201ENSMUST00000050143 801 ntBASIC17.09■□□□□ 0.33
Trim62Q80V85 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim62Q80V85 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trim62Q80V85 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim62Q80V85 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim62Q80V85 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim62Q80V85 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim62Q80V85 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim62Q80V85 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim62Q80V85 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Trim62Q80V85 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim62Q80V85 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim62Q80V85 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim62Q80V85 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.08■□□□□ 0.32
Trim62Q80V85 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim62Q80V85 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Trim62Q80V85 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms