Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Usp8Q80U87 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp8Q80U87 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Usp8Q80U87 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Usp8Q80U87 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.6■□□□□ 0.25
Usp8Q80U87 Timm23-208ENSMUST00000226683 750 ntBASIC16.6■□□□□ 0.25
Usp8Q80U87 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Usp8Q80U87 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.6■□□□□ 0.25
Usp8Q80U87 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp8Q80U87 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Usp8Q80U87 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.59■□□□□ 0.25
Usp8Q80U87 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Usp8Q80U87 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Usp8Q80U87 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Usp8Q80U87 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Usp8Q80U87 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Usp8Q80U87 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp8Q80U87 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp8Q80U87 Gm7638-201ENSMUST00000121348 967 ntBASIC16.58■□□□□ 0.24
Usp8Q80U87 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Usp8Q80U87 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp8Q80U87 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Usp8Q80U87 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Usp8Q80U87 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp8Q80U87 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Usp8Q80U87 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Usp8Q80U87 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp8Q80U87 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.58■□□□□ 0.24
Usp8Q80U87 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp8Q80U87 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.57■□□□□ 0.24
Usp8Q80U87 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Usp8Q80U87 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Gm13216-201ENSMUST00000117145 591 ntBASIC16.57■□□□□ 0.24
Usp8Q80U87 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Usp8Q80U87 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Usp8Q80U87 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Usp8Q80U87 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp8Q80U87 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.56■□□□□ 0.24
Usp8Q80U87 Il3ra-202ENSMUST00000223589 738 ntBASIC16.56■□□□□ 0.24
Usp8Q80U87 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms